List of accepted papers
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A compression algorithm for DNA sequences based on approximate
matching
--- Xin Chen, Sam Kwong, and Ming Li
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Protein Threading Based on Multiple Protein Structure Alignment
--- Tatsuya Akutsu and Kim Lan Sim
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Predicting Protein Disorder for N-, C-, and Internal Regions
--- Xiaohong Li, Meeta Rani, Pedro Romero, Zoran Obradovic, and A. Keith Dunker
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Predicting Binding Regions within Disordered Regions
--- Ethan Garner, Pedro Romero, A. Keith Dunker, and Zoran Obradovic
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Genome-scale gene expression analysis and pathway reconstruction
in KEGG
--- Mitsuteru Nakao, Hidemasa Bono, Shuichi Kawashima, Tomomi Kamiya, Kazushige Sato, Susumu Goto, and Minoru Kanehisa
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Tracing Synergetic Behavior of the QTLs Affecting Oral Glucose
Tolerance in the OLETF Rat
--- Akihiro Nakaya, Haretugu Hishigaki, and Shinichi Morishita
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On the reconstruction of ancient doubled circular genomes using
minimum reversals
--- Nadia El-Mabrouk and David Sankoff
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Finding Precursor Compounds in Secondary Metabolism
--- Masanori Arita, Kiyoshi Asai, and Takaaki Nishioka
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An EM-type Algorithm for Ordered Restriction Map Alignment
--- Hirotada Kobayashi and Hiroshi Imai
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Integrating Application Programs for Bioinformatics Using A web Browser
--- Yutaka Ueno, Kiyoshi Asai, and Masanori Arita
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Toward routine automatic pathway discovery from on-line scientific text abstracts
--- See-Kiong Ng and Marie Wong
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MIAX:A Novel System for Assesment of Macromolecular Interaction in Condensed
Phases. 1) Description of the Interaction Model and Simulation Algorithm
--- Carlos A. Del Carpio Munoz and Atsuhi Yoshimori
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Making High-level Queries on Diverse Genome Data: A Structured Genome
Document Database System based on GXML and GQL
--- Aaron Stokes, Hideo Matsuda, and Akihiro Hashimoto
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Greedy Algorithms for Minimizing Number of Primers in Multiple PCR Experiments
--- Koichiro Doi and Hiroshi Imai
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Towards Automatic Construction of Cell-Lineage of C.elegans From Nomarski DIC Microscope Images
--- Tomohiro Yasuda, Hideo Bannai, Shuichi Onami, Satoru Miyano, and Hiroaki Kitano
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Automated Processing of 2-D Gel Electrophoretograms of Genomic DNA
for Hunting Pathogenic DNA Molecular Changes
--- Katsutoshi Takahashi, Masayuki Nakazawa, Yasuo Watanabe, and Akihiko Konagaya
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Bio-calculus: Its Concept and Molecular Interaction
--- Masao Nagsaki, Shuichi Onami, Satoru Miyano, and Hiroaki Kitano
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A Generic Criterion for Gene Recongnitions in Genomic Sequences
--- Chungfan Kim, Akihiko Konagaya, and Kiyoshi Asai
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A system to find genetic networks using weighted network model
--- Tomohiro Moriyama, Ayumi Shinohara, Masayuki Takeda, Osamu Maruyama, GotoTakao, Satoru Miyano, and Satoru Kuhara