List of Accepted Software Demonstrations
|
T i t l e
|
A u t h o r (s) |
| CADLIVE SYSTEM: Map-based dynamic simulation of biochemical networks | Hiroyuki Kurata, Rei Iwasaki, Kouichi Masaki, Takayuki Tanaka, Kouji Mitsukiyo, Yoshiyuki Sumida |
| Selection of Causal Gene Sets from Gene Expression Profiles Using GeneFis, New Software Based on FNN | Hiroyuki Honda, Takeshi Kobayashi |
| Development of An Integrated System for Genetic Network Analysis and Microarray Data Management | Ji-Hung Kim, Kyung-Shin Lee, Pan-Gyu Kim, Hwan-Gue Cho |
| An Open Source Client-Server System for the Analysis of Affymetrix Microarray Data | Lars Martin Jakt, Mitsuhiro Okada, Shin-Ichi Nishikawa |
| ASIAN: A Web Site for Network Inference | Katsuhisa Horimoto, Hiroyuki Toh, Sachiyo Aburatani, Nobuyoshi Sugaya, Hiroo Murakami, Makihiko Sato, Shigeru Saito, Kousuke Goto, Masaki Fumoto |
| Netview: Application Software for constructing and visually exploring phylogenetic networks | Kirill Kryukov, Naruya Saitou |
| Integrated System for Inference of Gene Expression Network | Masahiko Nakatsui, Takanori Ueda, Masahiro Okamoto |
| MutationView: An Integrated Knowledge Base for Mutations and Polymorphisms in Human Disease Genes - Automatical Extraction of Disease-associated Knowledge - | Masafumi Ohtsubo, Susumu Mitsuyama, Takashi Kawamura, Nobuyoshi Shimizu, Shinsei Minoshima |
| BirdsAnts: Bringing Informative Rules from a Database System, Aimed at Novel Targets Search | Motoi Tobita, Ken Horiuchi, Kenji Araki, Masashi Nemoto, Tetsuo Nishikawa |
| ecell2d : distributed E-CELL2 | Andrew Stubbings, Naota Ishikawa, Takashi Yamazaki, Ariya Fujita, Iriko Kaneko, Yoshinari Fukui, Toshikazu Ebisuzaki |
| Integrated Distributed Computing Environment on the G-language GAE v.2 | Ryo Hattori, Kazuharu Arakawa, Hayatoro Kouichi, Masaru Tomita |
| SuperNORM: a computer program for parametric normalization of microarray data | Tomokazu Konishi, Masanori Yoshida, Kenya Shibahara |
| E-Cell System Version 3: A Software Platform for Integrative Computational Biology | Kouichi Takahashi, Takeshi Sakurada, Kazunari Kaizu, Tomoya Kitayama, Satya Arjunan, Tatsuya Ishida, Gabor Bereczki, Daiki Ito, Masahiro Sugimoto, Takashi Komori, Ohta Seiji, Masaru Tomita |
| BPE: Biopathway Executer for large-scale biopathway modeling and simulation | Masao Nagasaki, Atsushi Doi, Kazuko Ueno, Eri Torikai, Hiroshi Matsuno, Satoru Miyano |
| Bioinformatics and Computational Biology with Biopython | Michiel J.L. de Hoon, Brad Chapman, Iddo Friedberg |
| Representing Metabolic Networks by the Substrate-Product Relationships | Masanori Arita |
E-mail: giw2004@ims.u-tokyo.ac.jp